3D Medical image segmentation with transformers tutorial
Implement a UNETR to perform 3D medical image segmentation on the BRATS dataset
An overview of Unet architectures for semantic segmentation and biomedical image segmentation
Learn everything about one of the most famous convolutional neural network architectures that is widely used on image segmentation.
Introduction to medical image processing with Python: CT lung and vessel segmentation without labels
Find out the basics of CT imaging and segment lungs and vessels without labels with 3D medical image processing techniques.
Transfer learning in medical imaging: classification and segmentation
What is transfer learning? How can it help us classify and segment different types of medical images? Are pretrained computer vision models useful for medical imaging tasks? How is 2D image classification different from 3D MRI segmentation in terms of transfer learning?
Deep learning in MRI beyond segmentation: Medical image reconstruction, registration, and synthesis
How can deep learning revolutionize medical image analysis beyond segmentation? In this article, we will see a couple of interesting applications in medical imaging such as medical image reconstruction, image synthesis, super-resolution, and registration in medical images
Introduction to 3D medical imaging for machine learning: preprocessing and augmentations
Learn how to apply 3D transformations for medical image preprocessing and augmentation, to setup your awesome deep learning pipeline
Understanding coordinate systems and DICOM for deep learning medical image analysis
Multiple introductory concepts regarding deep learning in medical imaging, such as coordinate system and dicom data extraction from the machine learning perspective.
Deep learning in medical imaging - 3D medical image segmentation with PyTorch
The basic MRI foundations are presented for tensor representation, as well as the basic components to apply a deep learning method that handles the task-specific problems(class imbalance, limited data). Moreover, we present some features of the open source medical image segmentation library. Finally, we discuss our preliminary experimental results and provide sources to find medical imaging data.