Accelerate healthcare progress by applying AI into disease prediction, treatment, medical images and electronic health records.

Medical · Attention and Transformers · Pytorch

3D Medical image segmentation with transformers tutorial

Implement a UNETR to perform 3D medical image segmentation on the BRATS dataset

Convolutional Neural Networks · Medical · Computer Vision · Pytorch

An overview of Unet architectures for semantic segmentation and biomedical image segmentation

Learn everything about one of the most famous convolutional neural network architectures that is widely used on image segmentation.

Medical · Computer Vision

Introduction to medical image processing with Python: CT lung and vessel segmentation without labels

Find out the basics of CT imaging and segment lungs and vessels without labels with 3D medical image processing techniques.

Medical · Computer Vision

Transfer learning in medical imaging: classification and segmentation

What is transfer learning? How can it help us classify and segment different types of medical images? Are pretrained computer vision models useful for medical imaging tasks? How is 2D image classification different from 3D MRI segmentation in terms of transfer learning?

Medical · Computer Vision

Deep learning in MRI beyond segmentation: Medical image reconstruction, registration, and synthesis

How can deep learning revolutionize medical image analysis beyond segmentation? In this article, we will see a couple of interesting applications in medical imaging such as medical image reconstruction, image synthesis, super-resolution, and registration in medical images

Medical · Computer Vision

Introduction to 3D medical imaging for machine learning: preprocessing and augmentations

Learn how to apply 3D transformations for medical image preprocessing and augmentation, to setup your awesome deep learning pipeline

Medical · Computer Vision

Understanding coordinate systems and DICOM for deep learning medical image analysis

Multiple introductory concepts regarding deep learning in medical imaging, such as coordinate system and dicom data extraction from the machine learning perspective.

Medical · Computer Vision · Pytorch

Deep learning in medical imaging - 3D medical image segmentation with PyTorch

The basic MRI foundations are presented for tensor representation, as well as the basic components to apply a deep learning method that handles the task-specific problems(class imbalance, limited data). Moreover, we present some features of the open source medical image segmentation library. Finally, we discuss our preliminary experimental results and provide sources to find medical imaging data.